Best Billing Software for MSPs
MSP billing is more complicated than sending invoices. You're reconciling PSA time entries, distributor charges, licence counts, and usage-based cloud fees into accurate client bills. The right billing tool syncs with your PSA, imports distributor data, and catches discrepancies before clients do. This page lists billing and invoicing products in the catalog.
How to choose billing software
PSA integration
Most MSPs bill from their PSA. If you need a separate billing tool, check whether it syncs agreements, time entries, and products from ConnectWise, Autotask, or Halo without manual exports.
Distributor and vendor imports
Reconciling Pax8, Ingram, or Microsoft invoices against client contracts is tedious. Some billing tools import distributor data and flag mismatches automatically.
Usage-based and metered billing
If you bill per-user, per-device, or per-GB, you need a tool that pulls counts from your systems and applies the right rates. Manual counts lead to revenue leakage.
Accounting integration
Check whether the billing tool pushes invoices to QuickBooks, Xero, or your accounting system. Double-entry between billing and accounting wastes time and causes errors.
MSP Billing comparison
Products are ranked by capability signals: featured products first, then by API availability, MCP support, CLI, AI features, and PSA integrations. Data comes from the MSP Navigator catalog and is updated as vendors are enriched.
| Product | Vendor | Capabilities | PSA Integrations | MSP Usage | Pricing |
|---|---|---|---|---|---|
| ConnectWise | Use internally | Contact vendor | |||
2 MSP360 MSP360 + HaloPSA integration automates ticketing and billing, cuts manual work, reduces errors, and helps MSPs scale faster with a seamless, connected workflow. | MSP360 | Use internally | Contact vendor | ||
| Hyalto | Use internally | Contact vendor | |||
4 Payments Calendly Payments offers flexible, built-in payment tools to charge upfront for meetings, sell packages, and send invoices directly within the platform. | Calendly | — | — | Contact vendor | |
5 ABC Solutions ABC Solutions is a full-service business management partner dedicated to empowering IT Solution Providers and Managed Service Providers (MSPs) to streamline operations, boost profitability, and reclai | ABC Solutions | Use internally | Contact vendor | ||
6 Dynamics GP Integration Microsoft Dynamics GP (Great Plains) gives companies complete control over finances, resources, and decision-defining information. The ConnectWise Manage integration with Microsoft Dynamics GP allows | Dynamics GP Integration | Resell to clients | Contact vendor | ||
7 GreatAmerica GreatAmerica brings the As-A-Service technology equipment financing model to solution providers without the risk and cash flow impact of HaaS with Hardware as a Rental® or HaaR®. | GreatAmerica | Resell to clients | Contact vendor | ||
| Stripe | Resell to clients | Contact vendor | |||
| Stripe | Resell to clients | Contact vendor | |||
10 Atria PSA Integration Automate101 develops and markets Atria, a Software Solution which helps MSPs (Managed Service Providers) to provide a unified Active Directory, Workspace and Microsoft365 Management po | Atria | Use internally | Contact vendor | ||
| Benji Pays | Use or resell | Contact vendor | |||
| Sync365 | Use internally | Contact vendor | |||
13 Billing AIQ Billing AIQ is an intelligence suite that automates multi-cloud invoice processing, margin management, and customer billing for MSPs and cloud resellers, featuring white-labeled customer billing portals. | Aquila Clouds | — | Use internally | Contact vendor | |
14 CSP Portal The CSP Portal provides a central place to manage DickerData Office 365 licenses, offering easy syncing via Microsoft, ConnectWise, and AutoTask integrations to automate license billing and agreement updates. | Lancom Technology | — | Use internally | Contact vendor | |
| PaySimple | — | Resell to clients | Contact vendor | ||
| CloudOlive | Use internally | Contact vendor | |||
| FlexPoint | Use internally | Contact vendor | |||
18 Resale Partners Resale Portal Resale partners provides an integration and billing platform for ICT and Telecommunication resellers. This platform retrieves data from your suppliers and 3rd party applications and allo | ResalePartners | Resell to clients | Contact vendor | ||
19 Xero Accounting Integration CloudBanking Platform provides seamless integration between ConnectWise Manage and Xero Accounting Software. It allows you to sync all your accounting data, including invoices, expenses, procurements, | Xero | Use internally | Contact vendor | ||
| Adfin | — | Contact vendor | |||
| Cloudbilling | Use internally | Contact vendor | |||
| Kaseya | Use internally | Contact vendor | |||
| Datagate | Use internally | Contact vendor | |||
24 QCommission QCommission is a powerful, online, flexible sales commission software. QCommission has tight integration with ConnectWise Manage and many accounting/CRM systems to bring in sales details and can also | QCommission | Use internally | Contact vendor | ||
| Authorize.net | — | Resell to clients | Contact vendor | ||
26 Billing Automation Platform ResalePartners' platform automates billing processes for telecom, ICT, and MSP businesses, offering features like purchase control and integration with over 110 vendors and platforms. | ResalePartners | — | Use internally | Contact vendor | |
| Aquila Clouds | — | Use internally | Contact vendor | ||
| ApplicationLink | — | Use internally | Contact vendor | ||
29 Managed Billing Reconciliation Service Gradient MSP offers a managed service where their team handles the entire billing reconciliation process, freeing up MSP staff and ensuring accurate and timely billing. | Gradient MSP | — | Resell to clients | Contact vendor | |
30 | Oryx | — | Resell to clients | Contact vendor | |
31 Reconcile Automates vendor billing reconciliation for MSPs, catching missed licenses, incorrect quantities, and unbilled services to ensure accurate billing and reduce disputes. | Gradient MSP | — | Use internally | Contact vendor | |
| Cloud Depot | — | Use internally | Contact vendor | ||
| Resello | — | Use internally | Contact vendor | ||
34 Xero Invoicing Xero Invoicing provides tools to create and send professional invoices, track payments, and automate billing processes for small businesses. | Xero | — | Resell to clients | Contact vendor | |
35 Microsoft Dynamics SL Legacy Integration is currently in a legacy status and unavailable for new purchases. Current integration users will NOT be affected by this status. | Microsoft | — | Contact vendor | ||
36 AB Software Autonox Autonox As fully Certified Datto Autotask PSA Consultant’s and software developers, AB Software pride themselves on designing and developing only the most feature rich and comprehensive Datto integrat | AB Software | Resell to clients | Contact vendor | ||
37 ApplicationLink | VoiceWorks VoiceWorks to Autotask – billing integration ApplicationLink was founded in 2014, we operate from 2 locations in the Netherlands (Schiedam and Breda) and we are providing solutions to partners across | ApplicationLink | Use internally | Contact vendor | ||
38 AT2R Autotask to Reckon Desktop Sync Kiss IT is a Technology Managed Service Provider (MSP) in New Zealand. We have been established since 2008 and provide IT Support services to business in New Zealand. W | AT2R | Use internally | Contact vendor | ||
39 Emersion Emersion empowers MSPs to be a one-stop IT provider with real-time ConnectWise sync, automated billing, and deep vendor integrations. Sell telco services, manage software licenses, and streamline invo | Emersion | Use internally | Contact vendor | ||
40 Essensus AB Fortnox by Essensus Essensus provides customers with IT services such as technical support, consulting and operations related to business critical IT infrastructure. We have a deep love for technology | Essensus | Resell to clients | Contact vendor | ||
| Fortnox | Resell to clients | Contact vendor | |||
| Gozynta | Use internally | Contact vendor | |||
43 Happen Business Pty, Ltd. Jim2 Autotask PSA Connector Happen Business Pty Limited is the provider of the leading mid-tier ERP/Accounting solution, Jim2 Business Engine. With over 20 years’ experience with IT Service Providers, | Happen Business Pty, Ltd. | Use internally | Contact vendor | ||
44 MYOB Integration MYOB is the leading accounting software solution for SME's in Australia & NZ. It is easy to use, is a whizz with numbers and helps keep your inventory in check. It’s also ideal for more complex requir | MYOB | Resell to clients | Contact vendor | ||
45 Onebill Software, Inc OneBill’s Billing-as-a-Service platform supports and simplifies the complex billing and revenue management needs of Service Providers and their resellers. OneBill is an enterprise class scalable, flex | BILL | Use or resell | Contact vendor | ||
46 Promys Software-for-technology solution provider Promys automates operational business processes for MSPs, including recurring billing for managed services and subscriptions as well as real-time contract pro | Promys | Use internally | Contact vendor | ||
47 Savitas Strategic Software Solutions, LLC – DriveDollar Savitas is a leading systems integrator and independent software vendor that specializes in providing innovative solutions to challenging business problems. Savitas produced DriveDollar to help manage | Savitas Strategic Software Solutions, LLC – DriveDollar | Use internally | Contact vendor | ||
48 Smart IT AT2Sage AT2Sage was developed to allow Autotask users to download invoices and purchase orders from Autotask and send them to Sage 50 Accounts ready for posting. With seamless integration using the Au | Smart IT | Use internally | Contact vendor | ||
49 Wise-Sync Put your manual accounting tasks on autopilot and take back control of your finances with this cloud accounting integration. | Wise-Sync & Wise-Pay | Use internally | Contact vendor | ||
| Zomentum | Use internally | Contact vendor | |||
| AccountingSuite | — | Resell to clients | Contact vendor | ||
52 Billing & Invoicing Cloudmore provides billing and invoicing solutions for CSPs, ensuring accurate billing, price management, and renewal governance. | Cloudmore | — | Use internally | Contact vendor | |
| Work 365 | — | Use internally | Contact vendor | ||
54 Custom Billing (1nvoice) Streamline billing with flexible features that consolidate charges for your entire solution into a single invoice. | Custom Reports, Dashboards | — | Resell to clients | Contact vendor | |
55 End Customer Billing Octopus Cloud's End Customer Billing solution automates and streamlines SPLA usage billing, reducing errors and saving time for cloud providers. | Octopus Cloud | — | Use internally | Contact vendor | |
56 Macali PEPPOL Macali PEPPOL enables users to send and receive e-invoices across Denmark and Europe, supporting various formats and countries to eliminate rejected invoices. | Macali | — | Resell to clients | Contact vendor | |
57 NexNow Hosted Invoices for ConnectWise PSA A solution for fast, fully customizable invoice generation for ConnectWise PSA, offering improved branding and flexibility. | NexNow | — | Use internally | Contact vendor | |
58 Odoo Subscriptions A subscription management application for recurring billing and customer subscriptions. | Odoo | — | Resell to clients | Contact vendor | |
| Xero | — | Resell to clients | Contact vendor | ||
| Alternative Payments | — | Use internally | Contact vendor | ||
| Worldpay | — | Resell to clients | Contact vendor | ||
62 Rev.io Billing Rev.io Billing is a cloud-based billing and invoicing solution for managing complex billing scenarios, including recurring revenue, usage-based billing, and subscription management. | Rev.io PSA | — | Use internally | Contact vendor | |
63 Unified Billing Clearfly's Unified Billing service handles client invoicing and payments for partners, simplifying billing processes. | Clearfly | — | Resell to clients | Contact vendor | |
64 Usage Programs Enable technology and equipment providers to bill customers according to their actual consumption instead of relying on fixed monthly payments. | GreatAmerica | — | Resell to clients | Contact vendor | |
65 Automatic Invoicing MSP Beans provides automatic invoicing services to streamline billing processes and improve cash flow for MSPs. | MSP Beans | — | — | Contact vendor | |
| D-tools | — | — | Contact vendor | ||
| Invoice Ninja | — | — | Contact vendor | ||
68 Invoicing Wave Invoicing allows small businesses to create and send professional invoices to customers, track invoice status, and get paid faster. | Wave Accounting | — | — | Contact vendor | |
69 Invoicing Estimate Rocket provides integrated invoicing features to help contractors get paid faster with automated follow-ups and online payment options. | Estimate Rocket | — | — | Contact vendor | |
| BlueSnap | — | — | Contact vendor | ||
71 Vendor Management Invoice Ninja provides tools for managing vendors, tracking payments, and streamlining vendor-related financial operations. | Invoice Ninja | — | — | Contact vendor |
Frequently asked questions
Why not just use PSA billing?
PSA billing works for simple setups. Once you're reconciling distributor charges, metering usage, or handling complex agreements, dedicated billing tools save time and catch errors the PSA misses.
What is usage-based billing?
Usage-based billing charges clients based on what they consume: users, devices, storage, or API calls. It requires pulling counts from source systems (RMM, M365, cloud) and applying contractual rates, which manual processes often get wrong.
How do MSPs reconcile distributor invoices?
Distributors like Pax8 and Ingram send monthly invoices for Microsoft, security, and other subscriptions. Reconciliation means matching those charges to client contracts and catching discrepancies. Some billing tools automate this; others require spreadsheets.
Can billing software handle taxes and compliance?
Tax handling varies. Some products calculate sales tax by jurisdiction; others require you to configure tax rules manually. If you bill across states or countries, check what the product supports before buying.
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