Comparison Guide

Best Billing Software for MSPs

MSP billing is more complicated than sending invoices. You're reconciling PSA time entries, distributor charges, licence counts, and usage-based cloud fees into accurate client bills. The right billing tool syncs with your PSA, imports distributor data, and catches discrepancies before clients do. This page lists billing and invoicing products in the catalog.

71products compared

How to choose billing software

1

PSA integration

Most MSPs bill from their PSA. If you need a separate billing tool, check whether it syncs agreements, time entries, and products from ConnectWise, Autotask, or Halo without manual exports.

2

Distributor and vendor imports

Reconciling Pax8, Ingram, or Microsoft invoices against client contracts is tedious. Some billing tools import distributor data and flag mismatches automatically.

3

Usage-based and metered billing

If you bill per-user, per-device, or per-GB, you need a tool that pulls counts from your systems and applies the right rates. Manual counts lead to revenue leakage.

4

Accounting integration

Check whether the billing tool pushes invoices to QuickBooks, Xero, or your accounting system. Double-entry between billing and accounting wastes time and causes errors.

MSP Billing comparison

Ranked byAPI + MCP + integrations

Products are ranked by capability signals: featured products first, then by API availability, MCP support, CLI, AI features, and PSA integrations. Data comes from the MSP Navigator catalog and is updated as vendors are enriched.

ProductVendorCapabilitiesPSA IntegrationsMSP UsagePricing
ConnectWise
ConnectWise PSAHalo PSA
Use internallyContact vendor
2MSP360 logo
MSP360

MSP360 + HaloPSA integration automates ticketing and billing, cuts manual work, reduces errors, and helps MSPs scale faster with a seamless, connected workflow.

MSP360
Halo PSA
Use internallyContact vendor
Hyalto
Autotask PSAConnectWise PSA
Use internallyContact vendor
4Calendly logo
Payments

Calendly Payments offers flexible, built-in payment tools to charge upfront for meetings, sell packages, and send invoices directly within the platform.

Calendly
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—Contact vendor
5ABC Solutions logo
ABC Solutions

ABC Solutions is a full-service business management partner dedicated to empowering IT Solution Providers and Managed Service Providers (MSPs) to streamline operations, boost profitability, and reclai

ABC Solutions
ConnectWise PSA
Use internallyContact vendor
6Dynamics GP Integration logo
Dynamics GP Integration

Microsoft Dynamics GP (Great Plains) gives companies complete control over finances, resources, and decision-defining information. The ConnectWise Manage integration with Microsoft Dynamics GP allows

Dynamics GP Integration
ConnectWise PSA
Resell to clientsContact vendor
7GreatAmerica logo
GreatAmerica

GreatAmerica brings the As-A-Service technology equipment financing model to solution providers without the risk and cash flow impact of HaaS with Hardware as a Rental® or HaaR®.

GreatAmerica
ConnectWise PSA
Resell to clientsContact vendor
Stripe
Halo PSA
Resell to clientsContact vendor
9Stripe logo
Stripe Billing

A subscription management and recurring billing platform for internet businesses.

Stripe
Halo PSA
Resell to clientsContact vendor
10Atria logo
Atria

PSA Integration Automate101 develops and markets Atria, a Software Solution which helps MSPs (Managed Service Providers) to provide a unified Active Directory, Workspace and Microsoft365 Management po

Atria
Autotask PSAConnectWise PSA
Use internallyContact vendor
Benji Pays
Halo PSAAutotask PSA
Use or resellContact vendor
Sync365
Autotask PSAConnectWise PSA
Use internallyContact vendor
13Aquila Clouds logo
Billing AIQ

Billing AIQ is an intelligence suite that automates multi-cloud invoice processing, margin management, and customer billing for MSPs and cloud resellers, featuring white-labeled customer billing portals.

Aquila Clouds
—
Use internallyContact vendor
14Lancom Technology logo
CSP Portal

The CSP Portal provides a central place to manage DickerData Office 365 licenses, offering easy syncing via Microsoft, ConnectWise, and AutoTask integrations to automate license billing and agreement updates.

Lancom Technology
—
Use internallyContact vendor
PaySimple
—
Resell to clientsContact vendor
CloudOlive
Autotask PSA
Use internallyContact vendor
FlexPoint
Halo PSA
Use internallyContact vendor
18ResalePartners logo
Resale Partners

Resale Portal Resale partners provides an integration and billing platform for ICT and Telecommunication resellers. This platform retrieves data from your suppliers and 3rd party applications and allo

ResalePartners
Autotask PSA
Resell to clientsContact vendor
19Xero logo
Xero Accounting Integration

CloudBanking Platform provides seamless integration between ConnectWise Manage and Xero Accounting Software. It allows you to sync all your accounting data, including invoices, expenses, procurements,

Xero
ConnectWise PSA
Use internallyContact vendor
20Adfin logo
Adfin

The only platform that fully automates getting paid, from invoice to chasing to cash.

Adfin
Halo PSA
—Contact vendor
Cloudbilling
Autotask PSAConnectWise PSA
Use internallyContact vendor
Kaseya
Autotask PSAConnectWise PSA
Use internallyContact vendor
Datagate
Halo PSAConnectWise PSA
Use internallyContact vendor
24QCommission logo
QCommission

QCommission is a powerful, online, flexible sales commission software. QCommission has tight integration with ConnectWise Manage and many accounting/CRM systems to bring in sales details and can also

QCommission
ConnectWise PSAAutotask PSA
Use internallyContact vendor
Authorize.net
—
Resell to clientsContact vendor
26ResalePartners logo
Billing Automation Platform

ResalePartners' platform automates billing processes for telecom, ICT, and MSP businesses, offering features like purchase control and integration with over 110 vendors and platforms.

ResalePartners
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Use internallyContact vendor
Aquila Clouds
—
Use internallyContact vendor
ApplicationLink
—
Use internallyContact vendor
29Gradient MSP logo
Managed Billing Reconciliation Service

Gradient MSP offers a managed service where their team handles the entire billing reconciliation process, freeing up MSP staff and ensuring accurate and timely billing.

Gradient MSP
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Resell to clientsContact vendor
Oryx
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Resell to clientsContact vendor
31Gradient MSP logo
Reconcile

Automates vendor billing reconciliation for MSPs, catching missed licenses, incorrect quantities, and unbilled services to ensure accurate billing and reduce disputes.

Gradient MSP
—
Use internallyContact vendor
Cloud Depot
—
Use internallyContact vendor
Resello
—
Use internallyContact vendor
34Xero logo
Xero Invoicing

Xero Invoicing provides tools to create and send professional invoices, track payments, and automate billing processes for small businesses.

Xero
—
Resell to clientsContact vendor
35Microsoft logo
Microsoft Dynamics SL Legacy

Integration is currently in a legacy status and unavailable for new purchases. Current integration users will NOT be affected by this status.

Microsoft
ConnectWise PSAHalo PSA
—Contact vendor
36AB Software logo
AB Software Autonox

Autonox As fully Certified Datto Autotask PSA Consultant’s and software developers, AB Software pride themselves on designing and developing only the most feature rich and comprehensive Datto integrat

AB Software
Autotask PSA
Resell to clientsContact vendor
37ApplicationLink logo
ApplicationLink | VoiceWorks

VoiceWorks to Autotask – billing integration ApplicationLink was founded in 2014, we operate from 2 locations in the Netherlands (Schiedam and Breda) and we are providing solutions to partners across

ApplicationLink
Autotask PSA
Use internallyContact vendor
38AT2R logo
AT2R

Autotask to Reckon Desktop Sync Kiss IT is a Technology Managed Service Provider (MSP) in New Zealand. We have been established since 2008 and provide IT Support services to business in New Zealand. W

AT2R
Autotask PSA
Use internallyContact vendor
39Emersion logo
Emersion

Emersion empowers MSPs to be a one-stop IT provider with real-time ConnectWise sync, automated billing, and deep vendor integrations. Sell telco services, manage software licenses, and streamline invo

Emersion
ConnectWise PSA
Use internallyContact vendor
40Essensus logo
Essensus AB

Fortnox by Essensus Essensus provides customers with IT services such as technical support, consulting and operations related to business critical IT infrastructure. We have a deep love for technology

Essensus
Autotask PSA
Resell to clientsContact vendor
41Fortnox logo
Fortnox

Sync customers and their invoices.

Fortnox
Halo PSA
Resell to clientsContact vendor
Gozynta
ConnectWise PSA
Use internallyContact vendor
43Happen Business Pty, Ltd. logo
Happen Business Pty, Ltd.

Jim2 Autotask PSA Connector Happen Business Pty Limited is the provider of the leading mid-tier ERP/Accounting solution, Jim2 Business Engine. With over 20 years’ experience with IT Service Providers,

Happen Business Pty, Ltd.
Autotask PSA
Use internallyContact vendor
44MYOB logo
MYOB Integration

MYOB is the leading accounting software solution for SME's in Australia & NZ. It is easy to use, is a whizz with numbers and helps keep your inventory in check. It’s also ideal for more complex requir

MYOB
ConnectWise PSA
Resell to clientsContact vendor
45BILL logo
Onebill Software, Inc

OneBill’s Billing-as-a-Service platform supports and simplifies the complex billing and revenue management needs of Service Providers and their resellers. OneBill is an enterprise class scalable, flex

BILL
Autotask PSA
Use or resellContact vendor
46Promys logo
Promys

Software-for-technology solution provider Promys automates operational business processes for MSPs, including recurring billing for managed services and subscriptions as well as real-time contract pro

Promys
ConnectWise PSA
Use internallyContact vendor
47Savitas Strategic Software Solutions, LLC – DriveDollar logo
Savitas Strategic Software Solutions, LLC – DriveDollar

Savitas is a leading systems integrator and independent software vendor that specializes in providing innovative solutions to challenging business problems. Savitas produced DriveDollar to help manage

Savitas Strategic Software Solutions, LLC – DriveDollar
Autotask PSA
Use internallyContact vendor
48
Smart IT

AT2Sage AT2Sage was developed to allow Autotask users to download invoices and purchase orders from Autotask and send them to Sage 50 Accounts ready for posting. With seamless integration using the Au

Smart IT
Autotask PSA
Use internallyContact vendor
49Wise-Sync & Wise-Pay logo
Wise-Sync

Put your manual accounting tasks on autopilot and take back control of your finances with this cloud accounting integration.

Wise-Sync & Wise-Pay
ConnectWise PSA
Use internallyContact vendor
Zomentum
ConnectWise PSA
Use internallyContact vendor
AccountingSuite
—
Resell to clientsContact vendor
52Cloudmore logo
Billing & Invoicing

Cloudmore provides billing and invoicing solutions for CSPs, ensuring accurate billing, price management, and renewal governance.

Cloudmore
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Use internallyContact vendor
Work 365
—
Use internallyContact vendor
54Custom Reports, Dashboards logo
Custom Billing (1nvoice)

Streamline billing with flexible features that consolidate charges for your entire solution into a single invoice.

Custom Reports, Dashboards
—
Resell to clientsContact vendor
55Octopus Cloud logo
End Customer Billing

Octopus Cloud's End Customer Billing solution automates and streamlines SPLA usage billing, reducing errors and saving time for cloud providers.

Octopus Cloud
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Use internallyContact vendor
56Macali logo
Macali PEPPOL

Macali PEPPOL enables users to send and receive e-invoices across Denmark and Europe, supporting various formats and countries to eliminate rejected invoices.

Macali
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Resell to clientsContact vendor
57NexNow logo
NexNow Hosted Invoices for ConnectWise PSA

A solution for fast, fully customizable invoice generation for ConnectWise PSA, offering improved branding and flexibility.

NexNow
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Use internallyContact vendor
58Odoo logo
Odoo Subscriptions

A subscription management application for recurring billing and customer subscriptions.

Odoo
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Resell to clientsContact vendor
Xero
—
Resell to clientsContact vendor
Alternative Payments
—
Use internallyContact vendor
Worldpay
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Resell to clientsContact vendor
62Rev.io PSA logo
Rev.io Billing

Rev.io Billing is a cloud-based billing and invoicing solution for managing complex billing scenarios, including recurring revenue, usage-based billing, and subscription management.

Rev.io PSA
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Use internallyContact vendor
63Clearfly logo
Unified Billing

Clearfly's Unified Billing service handles client invoicing and payments for partners, simplifying billing processes.

Clearfly
—
Resell to clientsContact vendor
64GreatAmerica logo
Usage Programs

Enable technology and equipment providers to bill customers according to their actual consumption instead of relying on fixed monthly payments.

GreatAmerica
—
Resell to clientsContact vendor
65MSP Beans logo
Automatic Invoicing

MSP Beans provides automatic invoicing services to streamline billing processes and improve cash flow for MSPs.

MSP Beans
—
—Contact vendor
D-tools
—
—Contact vendor
Invoice Ninja
—
—Contact vendor
68Wave Accounting logo
Invoicing

Wave Invoicing allows small businesses to create and send professional invoices to customers, track invoice status, and get paid faster.

Wave Accounting
—
—Contact vendor
69Estimate Rocket logo
Invoicing

Estimate Rocket provides integrated invoicing features to help contractors get paid faster with automated follow-ups and online payment options.

Estimate Rocket
—
—Contact vendor
BlueSnap
—
—Contact vendor
71Invoice Ninja logo
Vendor Management

Invoice Ninja provides tools for managing vendors, tracking payments, and streamlining vendor-related financial operations.

Invoice Ninja
—
—Contact vendor

Frequently asked questions

Why not just use PSA billing?

PSA billing works for simple setups. Once you're reconciling distributor charges, metering usage, or handling complex agreements, dedicated billing tools save time and catch errors the PSA misses.

What is usage-based billing?

Usage-based billing charges clients based on what they consume: users, devices, storage, or API calls. It requires pulling counts from source systems (RMM, M365, cloud) and applying contractual rates, which manual processes often get wrong.

How do MSPs reconcile distributor invoices?

Distributors like Pax8 and Ingram send monthly invoices for Microsoft, security, and other subscriptions. Reconciliation means matching those charges to client contracts and catching discrepancies. Some billing tools automate this; others require spreadsheets.

Can billing software handle taxes and compliance?

Tax handling varies. Some products calculate sales tax by jurisdiction; others require you to configure tax rules manually. If you bill across states or countries, check what the product supports before buying.

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